Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RBM48Q5RL73 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 AC007191.1-201ENST00000623179 2995 ntBASIC15.03■□□□□ -0
RBM48Q5RL73 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
RBM48Q5RL73 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.03■□□□□ -0
RBM48Q5RL73 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.03■□□□□ -0
RBM48Q5RL73 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
RBM48Q5RL73 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.03■□□□□ -0
RBM48Q5RL73 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.03■□□□□ -0
RBM48Q5RL73 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.03■□□□□ -0
RBM48Q5RL73 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.03■□□□□ -0
RBM48Q5RL73 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.03■□□□□ -0
RBM48Q5RL73 AC140113.3-201ENST00000605663 199 ntBASIC15.03■□□□□ -0
RBM48Q5RL73 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.03■□□□□ -0
RBM48Q5RL73 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.03■□□□□ -0
RBM48Q5RL73 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
RBM48Q5RL73 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.03■□□□□ -0
RBM48Q5RL73 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RBM48Q5RL73 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.03■□□□□ -0
RBM48Q5RL73 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RBM48Q5RL73 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.03■□□□□ -0
RBM48Q5RL73 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
RBM48Q5RL73 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RBM48Q5RL73 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.02■□□□□ -0
RBM48Q5RL73 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RBM48Q5RL73 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RBM48Q5RL73 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 AC243591.1-201ENST00000452967 1364 ntBASIC15.02■□□□□ -0
RBM48Q5RL73 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.02■□□□□ -0
RBM48Q5RL73 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.02■□□□□ -0
RBM48Q5RL73 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.02■□□□□ -0
RBM48Q5RL73 SIGLEC30P-201ENST00000455569 941 ntBASIC15.02■□□□□ -0
RBM48Q5RL73 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.02■□□□□ -0
RBM48Q5RL73 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RBM48Q5RL73 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.02■□□□□ -0
RBM48Q5RL73 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.02■□□□□ -0
RBM48Q5RL73 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.02■□□□□ -0
RBM48Q5RL73 AC005336.2-201ENST00000593183 939 ntBASIC15.02■□□□□ -0
RBM48Q5RL73 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.02■□□□□ -0
RBM48Q5RL73 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RBM48Q5RL73 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.02□□□□□ -0.01
RBM48Q5RL73 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.02□□□□□ -0.01
RBM48Q5RL73 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RBM48Q5RL73 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RBM48Q5RL73 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.02□□□□□ -0.01
RBM48Q5RL73 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RBM48Q5RL73 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RBM48Q5RL73 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RBM48Q5RL73 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RBM48Q5RL73 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RBM48Q5RL73 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.02□□□□□ -0.01
RBM48Q5RL73 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RBM48Q5RL73 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RBM48Q5RL73 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
RBM48Q5RL73 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RBM48Q5RL73 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RBM48Q5RL73 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBM48Q5RL73 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBM48Q5RL73 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBM48Q5RL73 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RBM48Q5RL73 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBM48Q5RL73 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
RBM48Q5RL73 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RBM48Q5RL73 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RBM48Q5RL73 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RBM48Q5RL73 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RBM48Q5RL73 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBM48Q5RL73 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBM48Q5RL73 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RBM48Q5RL73 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.01□□□□□ -0.01
RBM48Q5RL73 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBM48Q5RL73 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms