Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 PDPK2P-202ENST00000562415 1191 ntBASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 AC091167.2-201ENST00000579581 588 ntBASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KHDC1Q4VXA5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 AC131009.4-201ENST00000624048 1740 ntBASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 HMGA1P7-201ENST00000406908 502 ntBASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KHDC1Q4VXA5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
KHDC1Q4VXA5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
KHDC1Q4VXA5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
KHDC1Q4VXA5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
KHDC1Q4VXA5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
KHDC1Q4VXA5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 YBX2P1-201ENST00000394192 760 ntBASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 AC004832.2-201ENST00000426397 482 ntBASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 AC002347.1-201ENST00000569543 541 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms