Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 MPDU1-223ENST00000582151 728 ntBASIC14.61□□□□□ -0.07
ODF4Q2M2E3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF4Q2M2E3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 AC002310.6-201ENST00000624451 1377 ntBASIC14.6□□□□□ -0.07
ODF4Q2M2E3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 PTCHD3P3-201ENST00000403073 906 ntBASIC14.6□□□□□ -0.07
ODF4Q2M2E3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 AC087163.2-201ENST00000457299 853 ntBASIC14.6□□□□□ -0.07
ODF4Q2M2E3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 SART3-203ENST00000546611 1184 ntBASIC14.6□□□□□ -0.07
ODF4Q2M2E3 AC139887.3-201ENST00000568585 713 ntBASIC14.6□□□□□ -0.07
ODF4Q2M2E3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 MTDHP4-201ENST00000600287 670 ntBASIC14.6□□□□□ -0.07
ODF4Q2M2E3 AL589182.2-201ENST00000619332 1049 ntBASIC14.6□□□□□ -0.07
ODF4Q2M2E3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF4Q2M2E3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 AC131009.4-201ENST00000624048 1740 ntBASIC14.59□□□□□ -0.07
ODF4Q2M2E3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 RBM17P3-201ENST00000417687 1192 ntBASIC14.59□□□□□ -0.07
ODF4Q2M2E3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 PAWRP1-201ENST00000451083 565 ntBASIC14.59□□□□□ -0.07
ODF4Q2M2E3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.59□□□□□ -0.07
ODF4Q2M2E3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms