Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXF2Q12947 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
FOXF2Q12947 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
FOXF2Q12947 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXF2Q12947 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXF2Q12947 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXF2Q12947 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.41□□□□□ -0.1
FOXF2Q12947 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.41□□□□□ -0.1
FOXF2Q12947 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXF2Q12947 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
FOXF2Q12947 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
FOXF2Q12947 AC008738.7-201ENST00000609744 511 ntBASIC14.41□□□□□ -0.1
FOXF2Q12947 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXF2Q12947 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXF2Q12947 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXF2Q12947 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
FOXF2Q12947 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
FOXF2Q12947 AC092171.3-201ENST00000610122 2651 ntBASIC14.41□□□□□ -0.1
FOXF2Q12947 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXF2Q12947 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF2Q12947 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
FOXF2Q12947 LINC01144-201ENST00000626198 1710 ntBASIC14.41□□□□□ -0.1
FOXF2Q12947 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF2Q12947 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF2Q12947 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
FOXF2Q12947 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXF2Q12947 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXF2Q12947 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF2Q12947 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXF2Q12947 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXF2Q12947 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF2Q12947 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF2Q12947 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXF2Q12947 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXF2Q12947 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF2Q12947 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF2Q12947 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FOXF2Q12947 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXF2Q12947 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF2Q12947 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
FOXF2Q12947 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF2Q12947 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXF2Q12947 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF2Q12947 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXF2Q12947 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
FOXF2Q12947 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXF2Q12947 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXF2Q12947 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
FOXF2Q12947 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXF2Q12947 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FOXF2Q12947 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms