Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH17Q12864 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH17Q12864 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH17Q12864 AC092919.2-201ENST00000623631 1645 ntBASIC16.6■□□□□ 0.25
CDH17Q12864 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH17Q12864 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH17Q12864 KRT18P2-201ENST00000447938 1258 ntBASIC16.6■□□□□ 0.25
CDH17Q12864 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.6■□□□□ 0.25
CDH17Q12864 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH17Q12864 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH17Q12864 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH17Q12864 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.6■□□□□ 0.25
CDH17Q12864 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDH17Q12864 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH17Q12864 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH17Q12864 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH17Q12864 AL078644.1-201ENST00000609881 752 ntBASIC16.6■□□□□ 0.25
CDH17Q12864 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CDH17Q12864 BX640515.1-201ENST00000617215 977 ntBASIC16.6■□□□□ 0.25
CDH17Q12864 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH17Q12864 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CDH17Q12864 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDH17Q12864 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CDH17Q12864 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH17Q12864 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CDH17Q12864 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH17Q12864 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH17Q12864 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.59■□□□□ 0.25
CDH17Q12864 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CDH17Q12864 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH17Q12864 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH17Q12864 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH17Q12864 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CDH17Q12864 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.59■□□□□ 0.25
CDH17Q12864 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH17Q12864 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH17Q12864 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH17Q12864 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH17Q12864 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CDH17Q12864 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CDH17Q12864 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH17Q12864 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH17Q12864 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH17Q12864 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CDH17Q12864 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.58■□□□□ 0.25
CDH17Q12864 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CDH17Q12864 AC007950.2-201ENST00000615045 2347 ntBASIC16.58■□□□□ 0.25
CDH17Q12864 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.58■□□□□ 0.25
CDH17Q12864 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.25
CDH17Q12864 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH17Q12864 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDH17Q12864 MIR648-201ENST00000385046 94 ntBASIC16.58■□□□□ 0.24
CDH17Q12864 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms