Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.47□□□□□ -0.09
SEC61A1P61619 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.47□□□□□ -0.09
SEC61A1P61619 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.47□□□□□ -0.09
SEC61A1P61619 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SEC61A1P61619 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SEC61A1P61619 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.46□□□□□ -0.09
SEC61A1P61619 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.46□□□□□ -0.09
SEC61A1P61619 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.46□□□□□ -0.09
SEC61A1P61619 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SEC61A1P61619 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.46□□□□□ -0.09
SEC61A1P61619 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.46□□□□□ -0.09
SEC61A1P61619 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SEC61A1P61619 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SEC61A1P61619 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SEC61A1P61619 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
SEC61A1P61619 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
SEC61A1P61619 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 AC073621.1-201ENST00000392730 636 ntBASIC14.46□□□□□ -0.09
SEC61A1P61619 ELK2BP-201ENST00000415014 1224 ntBASIC14.46□□□□□ -0.09
SEC61A1P61619 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.46□□□□□ -0.09
SEC61A1P61619 KRT18P27-201ENST00000427733 1299 ntBASIC14.46□□□□□ -0.09
SEC61A1P61619 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.46□□□□□ -0.09
SEC61A1P61619 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.46□□□□□ -0.09
SEC61A1P61619 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 POLD2P1-201ENST00000511220 997 ntBASIC14.46□□□□□ -0.09
SEC61A1P61619 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SEC61A1P61619 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.46□□□□□ -0.09
SEC61A1P61619 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.46□□□□□ -0.09
SEC61A1P61619 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.46□□□□□ -0.09
SEC61A1P61619 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.46□□□□□ -0.09
SEC61A1P61619 AL589182.2-201ENST00000619332 1049 ntBASIC14.46□□□□□ -0.09
SEC61A1P61619 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SEC61A1P61619 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.46□□□□□ -0.09
SEC61A1P61619 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
SEC61A1P61619 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.46□□□□□ -0.09
SEC61A1P61619 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.46□□□□□ -0.09
SEC61A1P61619 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61A1P61619 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SEC61A1P61619 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SEC61A1P61619 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.46□□□□□ -0.1
SEC61A1P61619 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SEC61A1P61619 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SEC61A1P61619 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SEC61A1P61619 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SEC61A1P61619 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SEC61A1P61619 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.46□□□□□ -0.1
SEC61A1P61619 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SEC61A1P61619 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SEC61A1P61619 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SEC61A1P61619 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.46□□□□□ -0.1
SEC61A1P61619 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.46□□□□□ -0.1
SEC61A1P61619 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 AC097637.2-201ENST00000624096 1997 ntBASIC14.45□□□□□ -0.1
SEC61A1P61619 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.45□□□□□ -0.1
SEC61A1P61619 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC61A1P61619 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC61A1P61619 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 PMS2P1-201ENST00000431037 1228 ntBASIC14.45□□□□□ -0.1
SEC61A1P61619 NCF1C-201ENST00000438382 1427 ntBASIC14.45□□□□□ -0.1
SEC61A1P61619 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.45□□□□□ -0.1
SEC61A1P61619 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 UNC93B6-202ENST00000528242 690 ntBASIC14.45□□□□□ -0.1
SEC61A1P61619 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms