Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLRN1P58418 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLRN1P58418 AC025580.3-201ENST00000617932 1424 ntBASIC14.71□□□□□ -0.05
CLRN1P58418 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CLRN1P58418 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
CLRN1P58418 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CLRN1P58418 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.71□□□□□ -0.05
CLRN1P58418 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLRN1P58418 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLRN1P58418 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLRN1P58418 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLRN1P58418 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
CLRN1P58418 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
CLRN1P58418 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.71□□□□□ -0.06
CLRN1P58418 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.71□□□□□ -0.06
CLRN1P58418 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.71□□□□□ -0.06
CLRN1P58418 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.71□□□□□ -0.06
CLRN1P58418 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CLRN1P58418 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.06
CLRN1P58418 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.71□□□□□ -0.06
CLRN1P58418 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
CLRN1P58418 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CLRN1P58418 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.7□□□□□ -0.06
CLRN1P58418 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CLRN1P58418 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CLRN1P58418 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CLRN1P58418 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CLRN1P58418 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CLRN1P58418 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.7□□□□□ -0.06
CLRN1P58418 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.7□□□□□ -0.06
CLRN1P58418 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.7□□□□□ -0.06
CLRN1P58418 MED15P5-201ENST00000423150 992 ntBASIC14.7□□□□□ -0.06
CLRN1P58418 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
CLRN1P58418 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.7□□□□□ -0.06
CLRN1P58418 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.7□□□□□ -0.06
CLRN1P58418 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.7□□□□□ -0.06
CLRN1P58418 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.7□□□□□ -0.06
CLRN1P58418 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.7□□□□□ -0.06
CLRN1P58418 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.7□□□□□ -0.06
CLRN1P58418 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.7□□□□□ -0.06
CLRN1P58418 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CLRN1P58418 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.7□□□□□ -0.06
CLRN1P58418 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLRN1P58418 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CLRN1P58418 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CLRN1P58418 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CLRN1P58418 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CLRN1P58418 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.69□□□□□ -0.06
CLRN1P58418 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CLRN1P58418 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CLRN1P58418 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CLRN1P58418 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.69□□□□□ -0.06
CLRN1P58418 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 AL591424.1-201ENST00000442569 1213 ntBASIC14.69□□□□□ -0.06
CLRN1P58418 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.69□□□□□ -0.06
CLRN1P58418 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.69□□□□□ -0.06
CLRN1P58418 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.69□□□□□ -0.06
CLRN1P58418 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.69□□□□□ -0.06
CLRN1P58418 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.69□□□□□ -0.06
CLRN1P58418 KRT19P2-202ENST00000557173 1012 ntBASIC14.69□□□□□ -0.06
CLRN1P58418 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.69□□□□□ -0.06
CLRN1P58418 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.69□□□□□ -0.06
CLRN1P58418 AL009183.1-201ENST00000603760 355 ntBASIC14.69□□□□□ -0.06
CLRN1P58418 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 AC027601.4-201ENST00000611259 610 ntBASIC14.69□□□□□ -0.06
CLRN1P58418 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.69□□□□□ -0.06
CLRN1P58418 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLRN1P58418 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms