Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CLDN8P56748 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLDN8P56748 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CLDN8P56748 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CLDN8P56748 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN8P56748 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN8P56748 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CLDN8P56748 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CLDN8P56748 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN8P56748 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN8P56748 AL513480.1-201ENST00000451731 511 ntBASIC15.62■□□□□ 0.09
CLDN8P56748 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN8P56748 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN8P56748 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN8P56748 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.62■□□□□ 0.09
CLDN8P56748 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN8P56748 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN8P56748 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN8P56748 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
CLDN8P56748 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
CLDN8P56748 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN8P56748 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
CLDN8P56748 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN8P56748 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN8P56748 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN8P56748 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN8P56748 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN8P56748 AC092384.3-202ENST00000564646 2873 ntBASIC15.61■□□□□ 0.09
CLDN8P56748 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
CLDN8P56748 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CLDN8P56748 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
CLDN8P56748 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN8P56748 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN8P56748 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CLDN8P56748 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN8P56748 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN8P56748 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN8P56748 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CLDN8P56748 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN8P56748 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 AC092910.1-201ENST00000482027 1129 ntBASIC15.61■□□□□ 0.09
CLDN8P56748 AC108751.1-201ENST00000490852 363 ntBASIC15.61■□□□□ 0.09
CLDN8P56748 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.61■□□□□ 0.09
CLDN8P56748 MIR4751-201ENST00000578027 74 ntBASIC15.61■□□□□ 0.09
CLDN8P56748 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CLDN8P56748 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN8P56748 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CLDN8P56748 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN8P56748 AC092919.2-201ENST00000623631 1645 ntBASIC15.61■□□□□ 0.09
CLDN8P56748 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CLDN8P56748 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDN8P56748 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN8P56748 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN8P56748 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN8P56748 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CLDN8P56748 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDN8P56748 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLDN8P56748 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CLDN8P56748 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CLDN8P56748 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CLDN8P56748 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN8P56748 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN8P56748 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN8P56748 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN8P56748 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN8P56748 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms