Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC105917.1-201ENST00000506637 2539 ntBASIC16.21■□□□□ 0.19
CDKN2DP55273 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.21■□□□□ 0.19
CDKN2DP55273 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDKN2DP55273 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CDKN2DP55273 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKN2DP55273 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKN2DP55273 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKN2DP55273 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKN2DP55273 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.21■□□□□ 0.19
CDKN2DP55273 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.21■□□□□ 0.19
CDKN2DP55273 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKN2DP55273 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.21■□□□□ 0.19
CDKN2DP55273 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKN2DP55273 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.21■□□□□ 0.19
CDKN2DP55273 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.21■□□□□ 0.19
CDKN2DP55273 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.21■□□□□ 0.19
CDKN2DP55273 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKN2DP55273 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKN2DP55273 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKN2DP55273 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 AC069224.1-201ENST00000566372 1715 ntBASIC16.21■□□□□ 0.19
CDKN2DP55273 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKN2DP55273 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKN2DP55273 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDKN2DP55273 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CDKN2DP55273 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
CDKN2DP55273 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CDKN2DP55273 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKN2DP55273 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKN2DP55273 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKN2DP55273 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDKN2DP55273 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDKN2DP55273 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDKN2DP55273 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKN2DP55273 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKN2DP55273 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKN2DP55273 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKN2DP55273 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKN2DP55273 KRT18P34-201ENST00000488218 1270 ntBASIC16.2■□□□□ 0.18
CDKN2DP55273 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.2■□□□□ 0.18
CDKN2DP55273 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKN2DP55273 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.2■□□□□ 0.18
CDKN2DP55273 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKN2DP55273 BX640515.1-201ENST00000617215 977 ntBASIC16.2■□□□□ 0.18
CDKN2DP55273 AC092865.6-201ENST00000642101 219 ntBASIC16.2■□□□□ 0.18
CDKN2DP55273 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDKN2DP55273 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDKN2DP55273 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2DP55273 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKN2DP55273 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKN2DP55273 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2DP55273 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CDKN2DP55273 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2DP55273 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDKN2DP55273 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDKN2DP55273 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDKN2DP55273 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.19■□□□□ 0.18
CDKN2DP55273 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKN2DP55273 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms