Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGA2P52926 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGA2P52926 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGA2P52926 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGA2P52926 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGA2P52926 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGA2P52926 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGA2P52926 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HMGA2P52926 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGA2P52926 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGA2P52926 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMGA2P52926 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGA2P52926 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGA2P52926 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGA2P52926 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.97□□□□□ -0.01
HMGA2P52926 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGA2P52926 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.97□□□□□ -0.01
HMGA2P52926 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 RNU1-129P-201ENST00000384064 167 ntBASIC14.97□□□□□ -0.01
HMGA2P52926 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.97□□□□□ -0.01
HMGA2P52926 HAUS4P1-201ENST00000406739 1145 ntBASIC14.97□□□□□ -0.01
HMGA2P52926 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGA2P52926 FAM185BP-201ENST00000443595 716 ntBASIC14.97□□□□□ -0.01
HMGA2P52926 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.97□□□□□ -0.01
HMGA2P52926 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
HMGA2P52926 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGA2P52926 OR7E47P-204ENST00000575924 449 ntBASIC14.97□□□□□ -0.01
HMGA2P52926 U1.21-201ENST00000580816 167 ntBASIC14.97□□□□□ -0.01
HMGA2P52926 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGA2P52926 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGA2P52926 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGA2P52926 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGA2P52926 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMGA2P52926 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGA2P52926 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.97□□□□□ -0.01
HMGA2P52926 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGA2P52926 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HMGA2P52926 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HMGA2P52926 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGA2P52926 AL109954.1-202ENST00000564051 2148 ntBASIC14.96□□□□□ -0.01
HMGA2P52926 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.96□□□□□ -0.01
HMGA2P52926 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGA2P52926 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
HMGA2P52926 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGA2P52926 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGA2P52926 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGA2P52926 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
HMGA2P52926 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGA2P52926 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HMGA2P52926 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
HMGA2P52926 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGA2P52926 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGA2P52926 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGA2P52926 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGA2P52926 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGA2P52926 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGA2P52926 AC245100.5-201ENST00000452108 331 ntBASIC14.96□□□□□ -0.01
HMGA2P52926 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGA2P52926 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGA2P52926 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGA2P52926 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
HMGA2P52926 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.96□□□□□ -0.01
HMGA2P52926 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGA2P52926 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGA2P52926 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGA2P52926 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGA2P52926 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGA2P52926 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HMGA2P52926 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
HMGA2P52926 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.96□□□□□ -0.02
HMGA2P52926 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
HMGA2P52926 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HMGA2P52926 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
HMGA2P52926 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGA2P52926 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGA2P52926 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGA2P52926 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGA2P52926 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGA2P52926 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms