Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN3P51790 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN3P51790 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN3P51790 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 U82695.1-201ENST00000635752 1889 ntBASIC17.96■□□□□ 0.47
CLCN3P51790 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN3P51790 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CLCN3P51790 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.96■□□□□ 0.47
CLCN3P51790 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.96■□□□□ 0.47
CLCN3P51790 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.96■□□□□ 0.47
CLCN3P51790 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLCN3P51790 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.96■□□□□ 0.46
CLCN3P51790 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLCN3P51790 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLCN3P51790 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.95■□□□□ 0.46
CLCN3P51790 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CLCN3P51790 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLCN3P51790 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLCN3P51790 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.95■□□□□ 0.46
CLCN3P51790 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.95■□□□□ 0.46
CLCN3P51790 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN3P51790 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLCN3P51790 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.95■□□□□ 0.46
CLCN3P51790 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.95■□□□□ 0.46
CLCN3P51790 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CLCN3P51790 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.95■□□□□ 0.46
CLCN3P51790 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN3P51790 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.95■□□□□ 0.46
CLCN3P51790 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CLCN3P51790 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
CLCN3P51790 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CLCN3P51790 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN3P51790 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN3P51790 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLCN3P51790 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN3P51790 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN3P51790 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN3P51790 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN3P51790 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CLCN3P51790 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLCN3P51790 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLCN3P51790 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN3P51790 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.94■□□□□ 0.46
CLCN3P51790 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN3P51790 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.94■□□□□ 0.46
CLCN3P51790 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN3P51790 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
CLCN3P51790 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN3P51790 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN3P51790 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN3P51790 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN3P51790 AC015922.1-201ENST00000421102 1152 ntBASIC17.94■□□□□ 0.46
CLCN3P51790 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.94■□□□□ 0.46
CLCN3P51790 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN3P51790 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
CLCN3P51790 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN3P51790 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN3P51790 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN3P51790 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN3P51790 ALOX12P2-203ENST00000570921 1945 ntBASIC17.94■□□□□ 0.46
CLCN3P51790 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 AGGF1P2-201ENST00000426656 2106 ntBASIC17.93■□□□□ 0.46
CLCN3P51790 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCN3P51790 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN3P51790 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CLCN3P51790 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
CLCN3P51790 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN3P51790 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCN3P51790 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN3P51790 AL512361.1-201ENST00000554200 418 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms