Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.48□□□□□ -0.09
CX3CR1P49238 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CX3CR1P49238 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.48□□□□□ -0.09
CX3CR1P49238 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.48□□□□□ -0.09
CX3CR1P49238 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 AP002469.2-201ENST00000531724 424 ntBASIC14.48□□□□□ -0.09
CX3CR1P49238 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 AL049840.3-201ENST00000602669 611 ntBASIC14.48□□□□□ -0.09
CX3CR1P49238 ACTL9-202ENST00000612068 1252 ntBASIC14.48□□□□□ -0.09
CX3CR1P49238 AC020765.3-201ENST00000613051 740 ntBASIC14.48□□□□□ -0.09
CX3CR1P49238 MIR7706-201ENST00000613747 67 ntBASIC14.48□□□□□ -0.09
CX3CR1P49238 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CX3CR1P49238 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.48□□□□□ -0.09
CX3CR1P49238 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CX3CR1P49238 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.48□□□□□ -0.09
CX3CR1P49238 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 LINC00554-201ENST00000564841 3011 ntBASIC14.48□□□□□ -0.09
CX3CR1P49238 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.48□□□□□ -0.09
CX3CR1P49238 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CX3CR1P49238 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CX3CR1P49238 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CX3CR1P49238 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CR1P49238 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CX3CR1P49238 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CX3CR1P49238 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CX3CR1P49238 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.47□□□□□ -0.09
CX3CR1P49238 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.47□□□□□ -0.09
CX3CR1P49238 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.47□□□□□ -0.09
CX3CR1P49238 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CX3CR1P49238 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CX3CR1P49238 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.47□□□□□ -0.09
CX3CR1P49238 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CX3CR1P49238 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.47□□□□□ -0.09
CX3CR1P49238 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.47□□□□□ -0.09
CX3CR1P49238 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.47□□□□□ -0.09
CX3CR1P49238 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms