Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 AC107375.1-201ENST00000564464 2231 ntBASIC11.07□□□□□ -0.64
PCP4P48539 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
PCP4P48539 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC11.06□□□□□ -0.64
PCP4P48539 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
PCP4P48539 REXO1L1P-201ENST00000379010 6598 ntBASIC11.06□□□□□ -0.64
PCP4P48539 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
PCP4P48539 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.06□□□□□ -0.64
PCP4P48539 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
PCP4P48539 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
PCP4P48539 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.06□□□□□ -0.64
PCP4P48539 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 PTGER4P2-CDK2AP2P2-201ENST00000619442 3123 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC11.06□□□□□ -0.64
PCP4P48539 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC11.06□□□□□ -0.64
PCP4P48539 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
PCP4P48539 KRT16P6-202ENST00000425692 1426 ntBASIC11.06□□□□□ -0.64
PCP4P48539 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 C1S-221ENST00000617865 2844 ntTSL 5 BASIC11.06□□□□□ -0.64
PCP4P48539 ITGB6-204ENST00000409967 2292 ntTSL 3 BASIC11.06□□□□□ -0.64
PCP4P48539 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.06□□□□□ -0.64
PCP4P48539 TMBIM7P-203ENST00000641617 1718 ntBASIC11.06□□□□□ -0.64
PCP4P48539 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.06□□□□□ -0.64
PCP4P48539 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
PCP4P48539 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PCP4P48539 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
PCP4P48539 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 LINC00365-201ENST00000413591 2618 ntTSL 3 BASIC11.05□□□□□ -0.64
PCP4P48539 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
PCP4P48539 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.05□□□□□ -0.64
PCP4P48539 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
PCP4P48539 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
PCP4P48539 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
PCP4P48539 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
PCP4P48539 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
PCP4P48539 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
PCP4P48539 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
PCP4P48539 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
PCP4P48539 ADGRE2-209ENST00000596991 2596 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
PCP4P48539 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.05□□□□□ -0.64
PCP4P48539 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
PCP4P48539 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC11.05□□□□□ -0.64
PCP4P48539 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 AC079089.2-201ENST00000531211 1277 ntBASIC11.05□□□□□ -0.64
PCP4P48539 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
PCP4P48539 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
PCP4P48539 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
PCP4P48539 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
PCP4P48539 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.05□□□□□ -0.64
PCP4P48539 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.05□□□□□ -0.64
PCP4P48539 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.05□□□□□ -0.64
PCP4P48539 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
PCP4P48539 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 AC215219.1-201ENST00000400706 1817 ntBASIC11.05□□□□□ -0.64
PCP4P48539 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PCP4P48539 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
PCP4P48539 NT5C3AP1-202ENST00000441170 1663 ntBASIC11.04□□□□□ -0.64
PCP4P48539 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.04□□□□□ -0.64
PCP4P48539 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC11.04□□□□□ -0.64
PCP4P48539 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.04□□□□□ -0.64
PCP4P48539 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms