Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SLC1A3P43003 HMGA1P7-201ENST00000406908 502 ntBASIC15.15■□□□□ 0.02
SLC1A3P43003 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SLC1A3P43003 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A3P43003 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A3P43003 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 RPL13AP23-201ENST00000480739 586 ntBASIC15.15■□□□□ 0.02
SLC1A3P43003 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A3P43003 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SLC1A3P43003 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A3P43003 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.15■□□□□ 0.02
SLC1A3P43003 AC034105.1-201ENST00000563488 319 ntBASIC15.15■□□□□ 0.02
SLC1A3P43003 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC1A3P43003 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A3P43003 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC1A3P43003 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.15■□□□□ 0.02
SLC1A3P43003 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC1A3P43003 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A3P43003 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.15■□□□□ 0.02
SLC1A3P43003 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC1A3P43003 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 TSPY26P-202ENST00000565928 3884 ntBASIC15.14■□□□□ 0.01
SLC1A3P43003 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC1A3P43003 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SLC1A3P43003 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC1A3P43003 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 AL590627.1-203ENST00000421194 1026 ntBASIC15.14■□□□□ 0.01
SLC1A3P43003 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC1A3P43003 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC1A3P43003 MIR3909-201ENST00000579518 119 ntBASIC15.14■□□□□ 0.01
SLC1A3P43003 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC1A3P43003 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC1A3P43003 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC1A3P43003 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 BX640515.1-201ENST00000617215 977 ntBASIC15.14■□□□□ 0.01
SLC1A3P43003 AC010507.1-201ENST00000633895 436 ntBASIC15.14■□□□□ 0.01
SLC1A3P43003 AC007064.4-201ENST00000637740 555 ntBASIC15.14■□□□□ 0.01
SLC1A3P43003 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC1A3P43003 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC1A3P43003 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC1A3P43003 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC1A3P43003 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A3P43003 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC1A3P43003 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC1A3P43003 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SLC1A3P43003 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC1A3P43003 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC1A3P43003 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC1A3P43003 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC1A3P43003 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC1A3P43003 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SLC1A3P43003 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 RNU1-129P-201ENST00000384064 167 ntBASIC15.13■□□□□ 0.01
SLC1A3P43003 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms