Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CXCL5P42830 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CXCL5P42830 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.15□□□□□ -0.62
CXCL5P42830 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.15□□□□□ -0.62
CXCL5P42830 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.15□□□□□ -0.62
CXCL5P42830 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
CXCL5P42830 GGT4P-201ENST00000623672 1708 ntBASIC11.15□□□□□ -0.63
CXCL5P42830 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
CXCL5P42830 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
CXCL5P42830 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CXCL5P42830 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
CXCL5P42830 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CXCL5P42830 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
CXCL5P42830 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
CXCL5P42830 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CXCL5P42830 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
CXCL5P42830 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
CXCL5P42830 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.14□□□□□ -0.63
CXCL5P42830 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
CXCL5P42830 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
CXCL5P42830 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.14□□□□□ -0.63
CXCL5P42830 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
CXCL5P42830 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.14□□□□□ -0.63
CXCL5P42830 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.14□□□□□ -0.63
CXCL5P42830 POM121L3P-201ENST00000419331 1163 ntBASIC11.14□□□□□ -0.63
CXCL5P42830 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
CXCL5P42830 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.14□□□□□ -0.63
CXCL5P42830 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.14□□□□□ -0.63
CXCL5P42830 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.14□□□□□ -0.63
CXCL5P42830 AC114341.1-201ENST00000618070 349 ntBASIC11.14□□□□□ -0.63
CXCL5P42830 AC073592.4-201ENST00000623827 446 ntBASIC11.14□□□□□ -0.63
CXCL5P42830 AP000867.4-201ENST00000641616 219 ntBASIC11.14□□□□□ -0.63
CXCL5P42830 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CXCL5P42830 LINC01144-201ENST00000626198 1710 ntBASIC11.14□□□□□ -0.63
CXCL5P42830 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.14□□□□□ -0.63
CXCL5P42830 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
CXCL5P42830 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC11.14□□□□□ -0.63
CXCL5P42830 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.14□□□□□ -0.63
CXCL5P42830 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.14□□□□□ -0.63
CXCL5P42830 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.14□□□□□ -0.63
CXCL5P42830 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CXCL5P42830 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CXCL5P42830 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CXCL5P42830 CICP4-201ENST00000447359 2812 ntBASIC11.13□□□□□ -0.63
CXCL5P42830 AC144831.1-201ENST00000573312 2656 ntBASIC11.13□□□□□ -0.63
CXCL5P42830 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CXCL5P42830 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CXCL5P42830 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
CXCL5P42830 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.13□□□□□ -0.63
CXCL5P42830 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.13□□□□□ -0.63
CXCL5P42830 AC148477.5-201ENST00000625164 1645 ntBASIC11.13□□□□□ -0.63
CXCL5P42830 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CXCL5P42830 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CXCL5P42830 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CXCL5P42830 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CXCL5P42830 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CXCL5P42830 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.13□□□□□ -0.63
CXCL5P42830 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.13□□□□□ -0.63
CXCL5P42830 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
CXCL5P42830 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CXCL5P42830 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
CXCL5P42830 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms