Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AL391005.1-201ENST00000623953 2435 ntBASIC18.07■□□□□ 0.48
RFC5P40937 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 TREML5P-201ENST00000421694 576 ntBASIC18.07■□□□□ 0.48
RFC5P40937 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.07■□□□□ 0.48
RFC5P40937 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RFC5P40937 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.07■□□□□ 0.48
RFC5P40937 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC5P40937 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC5P40937 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.07■□□□□ 0.48
RFC5P40937 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RFC5P40937 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.07■□□□□ 0.48
RFC5P40937 AL390955.2-201ENST00000603032 514 ntBASIC18.07■□□□□ 0.48
RFC5P40937 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 OR6D1P-203ENST00000641209 4860 ntBASIC18.07■□□□□ 0.48
RFC5P40937 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC5P40937 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RFC5P40937 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
RFC5P40937 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.06■□□□□ 0.48
RFC5P40937 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RFC5P40937 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC5P40937 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC5P40937 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RFC5P40937 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.06■□□□□ 0.48
RFC5P40937 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.06■□□□□ 0.48
RFC5P40937 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.06■□□□□ 0.48
RFC5P40937 AC105021.1-202ENST00000570572 669 ntBASIC18.06■□□□□ 0.48
RFC5P40937 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.06■□□□□ 0.48
RFC5P40937 AC011467.4-201ENST00000594891 528 ntBASIC18.06■□□□□ 0.48
RFC5P40937 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC5P40937 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.06■□□□□ 0.48
RFC5P40937 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC5P40937 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
RFC5P40937 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC5P40937 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RFC5P40937 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC5P40937 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC5P40937 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RFC5P40937 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.06■□□□□ 0.48
RFC5P40937 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC5P40937 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC5P40937 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC5P40937 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.06■□□□□ 0.48
RFC5P40937 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.06■□□□□ 0.48
RFC5P40937 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RFC5P40937 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.05■□□□□ 0.48
RFC5P40937 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 AC011676.5-201ENST00000624864 2660 ntBASIC18.05■□□□□ 0.48
RFC5P40937 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 ME2P1-201ENST00000426028 1970 ntBASIC18.05■□□□□ 0.48
RFC5P40937 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC5P40937 RNA5SP421-201ENST00000516864 134 ntBASIC18.05■□□□□ 0.48
RFC5P40937 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.05■□□□□ 0.48
RFC5P40937 BANF1P1-201ENST00000553684 263 ntBASIC18.05■□□□□ 0.48
RFC5P40937 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.05■□□□□ 0.48
RFC5P40937 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.05■□□□□ 0.48
RFC5P40937 AC073592.8-201ENST00000624126 511 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms