Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC4P35249 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC4P35249 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC4P35249 GGT4P-201ENST00000623672 1708 ntBASIC20.42■□□□□ 0.86
RFC4P35249 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC4P35249 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC4P35249 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.42■□□□□ 0.86
RFC4P35249 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.42■□□□□ 0.86
RFC4P35249 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.42■□□□□ 0.86
RFC4P35249 AC099336.1-201ENST00000417053 1171 ntBASIC20.42■□□□□ 0.86
RFC4P35249 BCYRN1-201ENST00000418539 200 ntBASIC20.42■□□□□ 0.86
RFC4P35249 AL442647.2-201ENST00000429864 857 ntBASIC20.42■□□□□ 0.86
RFC4P35249 ACTG1P3-201ENST00000431775 1114 ntBASIC20.42■□□□□ 0.86
RFC4P35249 AL355994.2-201ENST00000447882 704 ntBASIC20.42■□□□□ 0.86
RFC4P35249 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.42■□□□□ 0.86
RFC4P35249 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.42■□□□□ 0.86
RFC4P35249 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.42■□□□□ 0.86
RFC4P35249 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.42■□□□□ 0.86
RFC4P35249 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RFC4P35249 TDH-203ENST00000531764 1110 ntBASIC20.42■□□□□ 0.86
RFC4P35249 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RFC4P35249 MIR5189-201ENST00000577370 114 ntBASIC20.42■□□□□ 0.86
RFC4P35249 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.42■□□□□ 0.86
RFC4P35249 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.42■□□□□ 0.86
RFC4P35249 LINC01115-203ENST00000606068 577 ntBASIC20.42■□□□□ 0.86
RFC4P35249 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC4P35249 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RFC4P35249 TUBB1P2-201ENST00000422712 1306 ntBASIC20.42■□□□□ 0.86
RFC4P35249 TUBB1P1-201ENST00000503144 1300 ntBASIC20.42■□□□□ 0.86
RFC4P35249 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
RFC4P35249 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC4P35249 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.42■□□□□ 0.86
RFC4P35249 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC4P35249 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
RFC4P35249 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC4P35249 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.42■□□□□ 0.86
RFC4P35249 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.42■□□□□ 0.86
RFC4P35249 Z97205.2-201ENST00000564697 1639 ntBASIC20.42■□□□□ 0.86
RFC4P35249 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.41■□□□□ 0.86
RFC4P35249 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RFC4P35249 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RFC4P35249 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RFC4P35249 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RFC4P35249 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.41■□□□□ 0.86
RFC4P35249 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RFC4P35249 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RFC4P35249 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.41■□□□□ 0.86
RFC4P35249 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RFC4P35249 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.41■□□□□ 0.86
RFC4P35249 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.41■□□□□ 0.86
RFC4P35249 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFC4P35249 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.41■□□□□ 0.86
RFC4P35249 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RFC4P35249 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC4P35249 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC4P35249 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.4■□□□□ 0.86
RFC4P35249 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC4P35249 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC4P35249 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RFC4P35249 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RFC4P35249 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.4■□□□□ 0.86
RFC4P35249 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC4P35249 AC092933.1-201ENST00000393644 945 ntBASIC20.4■□□□□ 0.86
RFC4P35249 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFC4P35249 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.4■□□□□ 0.86
RFC4P35249 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
RFC4P35249 CSF2RBP1-201ENST00000447905 391 ntBASIC20.4■□□□□ 0.86
RFC4P35249 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC4P35249 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC4P35249 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RFC4P35249 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.4■□□□□ 0.86
RFC4P35249 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.4■□□□□ 0.86
RFC4P35249 MIR4321-201ENST00000592276 80 ntBASIC20.4■□□□□ 0.86
RFC4P35249 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.4■□□□□ 0.86
RFC4P35249 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.4■□□□□ 0.86
RFC4P35249 AL391069.4-201ENST00000609583 481 ntBASIC20.4■□□□□ 0.86
RFC4P35249 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.4■□□□□ 0.86
RFC4P35249 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC4P35249 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
RFC4P35249 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC4P35249 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.39■□□□□ 0.86
RFC4P35249 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RFC4P35249 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
RFC4P35249 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
RFC4P35249 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.39■□□□□ 0.86
RFC4P35249 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC4P35249 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC4P35249 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms