Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.89□□□□□ -0.03
GDF1P27539 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.88□□□□□ -0.03
GDF1P27539 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
GDF1P27539 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
GDF1P27539 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
GDF1P27539 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
GDF1P27539 MIR943-201ENST00000401286 94 ntBASIC14.88□□□□□ -0.03
GDF1P27539 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.88□□□□□ -0.03
GDF1P27539 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.88□□□□□ -0.03
GDF1P27539 AC093724.1-201ENST00000448659 1027 ntBASIC14.88□□□□□ -0.03
GDF1P27539 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GDF1P27539 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.88□□□□□ -0.03
GDF1P27539 AC051619.7-201ENST00000568314 623 ntBASIC14.88□□□□□ -0.03
GDF1P27539 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.88□□□□□ -0.03
GDF1P27539 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.88□□□□□ -0.03
GDF1P27539 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
GDF1P27539 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.88□□□□□ -0.03
GDF1P27539 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.88□□□□□ -0.03
GDF1P27539 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.88□□□□□ -0.03
GDF1P27539 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.88□□□□□ -0.03
GDF1P27539 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDF1P27539 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
GDF1P27539 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.87□□□□□ -0.03
GDF1P27539 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
GDF1P27539 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GDF1P27539 GGT3P-204ENST00000453783 1664 ntBASIC14.87□□□□□ -0.03
GDF1P27539 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.87□□□□□ -0.03
GDF1P27539 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
GDF1P27539 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 FAM220BP-201ENST00000377689 816 ntBASIC14.87□□□□□ -0.03
GDF1P27539 AL353705.2-201ENST00000428243 662 ntBASIC14.87□□□□□ -0.03
GDF1P27539 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.87□□□□□ -0.03
GDF1P27539 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.87□□□□□ -0.03
GDF1P27539 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.87□□□□□ -0.03
GDF1P27539 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.87□□□□□ -0.03
GDF1P27539 AC093214.1-201ENST00000511688 1107 ntBASIC14.87□□□□□ -0.03
GDF1P27539 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.87□□□□□ -0.03
GDF1P27539 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.87□□□□□ -0.03
GDF1P27539 AC140878.1-201ENST00000565277 250 ntBASIC14.87□□□□□ -0.03
GDF1P27539 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.87□□□□□ -0.03
GDF1P27539 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.87□□□□□ -0.03
GDF1P27539 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
GDF1P27539 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
GDF1P27539 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GDF1P27539 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.87□□□□□ -0.03
GDF1P27539 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GDF1P27539 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GDF1P27539 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.87□□□□□ -0.03
GDF1P27539 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDF1P27539 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
GDF1P27539 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 LINC01144-201ENST00000626198 1710 ntBASIC14.86□□□□□ -0.03
GDF1P27539 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms