Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCLP19338 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLP19338 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLP19338 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCLP19338 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCLP19338 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
NCLP19338 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
NCLP19338 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
NCLP19338 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
NCLP19338 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
NCLP19338 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
NCLP19338 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
NCLP19338 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NCLP19338 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
NCLP19338 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC19.64■□□□□ 0.73
NCLP19338 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 AKR1C7P-201ENST00000305623 895 ntBASIC19.64■□□□□ 0.73
NCLP19338 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.64■□□□□ 0.73
NCLP19338 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.64■□□□□ 0.73
NCLP19338 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.64■□□□□ 0.73
NCLP19338 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.64■□□□□ 0.73
NCLP19338 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.64■□□□□ 0.73
NCLP19338 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.64■□□□□ 0.73
NCLP19338 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.64■□□□□ 0.73
NCLP19338 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NCLP19338 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
NCLP19338 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.64■□□□□ 0.73
NCLP19338 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.64■□□□□ 0.73
NCLP19338 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCLP19338 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NCLP19338 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.64■□□□□ 0.73
NCLP19338 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
NCLP19338 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
NCLP19338 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.63■□□□□ 0.73
NCLP19338 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
NCLP19338 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NCLP19338 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.63■□□□□ 0.73
NCLP19338 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.63■□□□□ 0.73
NCLP19338 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.63■□□□□ 0.73
NCLP19338 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.63■□□□□ 0.73
NCLP19338 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.63■□□□□ 0.73
NCLP19338 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.63■□□□□ 0.73
NCLP19338 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
NCLP19338 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.63■□□□□ 0.73
NCLP19338 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.63■□□□□ 0.73
NCLP19338 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
NCLP19338 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
NCLP19338 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NCLP19338 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCLP19338 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.62■□□□□ 0.73
NCLP19338 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
NCLP19338 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.62■□□□□ 0.73
NCLP19338 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NCLP19338 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.62■□□□□ 0.73
NCLP19338 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NCLP19338 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.62■□□□□ 0.73
NCLP19338 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NCLP19338 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.62■□□□□ 0.73
NCLP19338 SIGLEC30P-201ENST00000455569 941 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms