Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
MS4A1P11836 MBP-202ENST00000355994 2772 ntTSL 5 BASIC21.13■□□□□ 0.97
MS4A1P11836 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.13■□□□□ 0.97
MS4A1P11836 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC21.12■□□□□ 0.97
MS4A1P11836 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.12■□□□□ 0.97
MS4A1P11836 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.12■□□□□ 0.97
MS4A1P11836 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MS4A1P11836 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
MS4A1P11836 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MS4A1P11836 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A1P11836 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC21.12■□□□□ 0.97
MS4A1P11836 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC21.12■□□□□ 0.97
MS4A1P11836 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
MS4A1P11836 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.11■□□□□ 0.97
MS4A1P11836 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
MS4A1P11836 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.11■□□□□ 0.97
MS4A1P11836 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.11■□□□□ 0.97
MS4A1P11836 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.11■□□□□ 0.97
MS4A1P11836 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 AC009078.2-202ENST00000463353 338 ntBASIC21.11■□□□□ 0.97
MS4A1P11836 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.11■□□□□ 0.97
MS4A1P11836 AC145285.3-201ENST00000564603 959 ntBASIC21.11■□□□□ 0.97
MS4A1P11836 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.11■□□□□ 0.97
MS4A1P11836 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
MS4A1P11836 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 FES-204ENST00000414248 2327 ntTSL 2 BASIC21.11■□□□□ 0.97
MS4A1P11836 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A1P11836 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.1■□□□□ 0.97
MS4A1P11836 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.1■□□□□ 0.97
MS4A1P11836 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
MS4A1P11836 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC21.1■□□□□ 0.97
MS4A1P11836 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 AC006449.6-201ENST00000612330 2296 ntBASIC21.1■□□□□ 0.97
MS4A1P11836 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.1■□□□□ 0.97
MS4A1P11836 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MS4A1P11836 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.1■□□□□ 0.97
MS4A1P11836 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MS4A1P11836 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
MS4A1P11836 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.1■□□□□ 0.97
MS4A1P11836 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.1■□□□□ 0.97
MS4A1P11836 AC023141.13-201ENST00000604991 943 ntBASIC21.1■□□□□ 0.97
MS4A1P11836 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MS4A1P11836 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.1■□□□□ 0.97
MS4A1P11836 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.1■□□□□ 0.97
MS4A1P11836 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC21.1■□□□□ 0.97
MS4A1P11836 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.1■□□□□ 0.97
MS4A1P11836 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A1P11836 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MS4A1P11836 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms