Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP2P08253 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP2P08253 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP2P08253 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MMP2P08253 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MMP2P08253 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP2P08253 AC061975.2-201ENST00000581722 295 ntBASIC16.48■□□□□ 0.23
MMP2P08253 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
MMP2P08253 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP2P08253 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP2P08253 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP2P08253 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP2P08253 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP2P08253 UXT-AS1-201ENST00000590504 1525 ntBASIC16.48■□□□□ 0.23
MMP2P08253 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP2P08253 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP2P08253 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP2P08253 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP2P08253 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP2P08253 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
MMP2P08253 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP2P08253 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MMP2P08253 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MMP2P08253 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.47■□□□□ 0.23
MMP2P08253 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP2P08253 FAM220BP-201ENST00000377689 816 ntBASIC16.47■□□□□ 0.23
MMP2P08253 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 GPS2P2-201ENST00000430745 888 ntBASIC16.47■□□□□ 0.23
MMP2P08253 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP2P08253 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MMP2P08253 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.47■□□□□ 0.23
MMP2P08253 MIR4321-201ENST00000592276 80 ntBASIC16.47■□□□□ 0.23
MMP2P08253 AL365330.1-201ENST00000607459 531 ntBASIC16.47■□□□□ 0.23
MMP2P08253 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.47■□□□□ 0.23
MMP2P08253 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP2P08253 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MMP2P08253 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP2P08253 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MMP2P08253 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
MMP2P08253 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
MMP2P08253 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.46■□□□□ 0.23
MMP2P08253 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MMP2P08253 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP2P08253 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
MMP2P08253 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
MMP2P08253 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.46■□□□□ 0.23
MMP2P08253 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP2P08253 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP2P08253 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP2P08253 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP2P08253 AC254562.1-201ENST00000417586 456 ntBASIC16.46■□□□□ 0.23
MMP2P08253 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.46■□□□□ 0.23
MMP2P08253 AC005237.2-201ENST00000434368 219 ntBASIC16.46■□□□□ 0.23
MMP2P08253 AC004967.1-201ENST00000453589 447 ntBASIC16.46■□□□□ 0.23
MMP2P08253 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.46■□□□□ 0.23
MMP2P08253 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.46■□□□□ 0.23
MMP2P08253 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.46■□□□□ 0.23
MMP2P08253 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms