Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS1P07996 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
THBS1P07996 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
THBS1P07996 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.13■□□□□ 0.01
THBS1P07996 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 AC092474.2-201ENST00000424288 719 ntBASIC15.13■□□□□ 0.01
THBS1P07996 AC140658.5-201ENST00000438532 169 ntBASIC15.13■□□□□ 0.01
THBS1P07996 KRT18P34-201ENST00000488218 1270 ntBASIC15.13■□□□□ 0.01
THBS1P07996 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 POLD2P1-201ENST00000511220 997 ntBASIC15.13■□□□□ 0.01
THBS1P07996 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS1P07996 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS1P07996 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.13■□□□□ 0.01
THBS1P07996 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
THBS1P07996 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.13■□□□□ 0.01
THBS1P07996 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.13■□□□□ 0.01
THBS1P07996 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.13■□□□□ 0.01
THBS1P07996 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS1P07996 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS1P07996 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS1P07996 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
THBS1P07996 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS1P07996 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.13■□□□□ 0.01
THBS1P07996 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS1P07996 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
THBS1P07996 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
THBS1P07996 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
THBS1P07996 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.12■□□□□ 0.01
THBS1P07996 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.12■□□□□ 0.01
THBS1P07996 PKD1P5-201ENST00000532415 10291 ntBASIC15.12■□□□□ 0.01
THBS1P07996 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
THBS1P07996 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.12■□□□□ 0.01
THBS1P07996 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
THBS1P07996 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.12■□□□□ 0.01
THBS1P07996 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.12■□□□□ 0.01
THBS1P07996 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 AC093724.1-201ENST00000448659 1027 ntBASIC15.12■□□□□ 0.01
THBS1P07996 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.12■□□□□ 0.01
THBS1P07996 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.12■□□□□ 0.01
THBS1P07996 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.12■□□□□ 0.01
THBS1P07996 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.12■□□□□ 0.01
THBS1P07996 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.12■□□□□ 0.01
THBS1P07996 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.12■□□□□ 0.01
THBS1P07996 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
THBS1P07996 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.12■□□□□ 0.01
THBS1P07996 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.12■□□□□ 0.01
THBS1P07996 AC008894.3-201ENST00000624324 3103 ntBASIC15.12■□□□□ 0.01
THBS1P07996 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.12■□□□□ 0.01
THBS1P07996 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
THBS1P07996 CDC14C-201ENST00000428251 1719 ntBASIC15.12■□□□□ 0.01
THBS1P07996 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THBS1P07996 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.11■□□□□ 0.01
THBS1P07996 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.11■□□□□ 0.01
THBS1P07996 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.11■□□□□ 0.01
THBS1P07996 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
THBS1P07996 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.11■□□□□ 0.01
THBS1P07996 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
THBS1P07996 AC034105.1-201ENST00000563488 319 ntBASIC15.11■□□□□ 0.01
THBS1P07996 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms