Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.83□□□□□ -0.2
CD74P04233 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CD74P04233 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.83□□□□□ -0.2
CD74P04233 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.83□□□□□ -0.2
CD74P04233 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.83□□□□□ -0.2
CD74P04233 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CD74P04233 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CD74P04233 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.83□□□□□ -0.2
CD74P04233 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.83□□□□□ -0.2
CD74P04233 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
CD74P04233 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.83□□□□□ -0.2
CD74P04233 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CD74P04233 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.83□□□□□ -0.2
CD74P04233 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.83□□□□□ -0.2
CD74P04233 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.83□□□□□ -0.2
CD74P04233 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CD74P04233 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.83□□□□□ -0.2
CD74P04233 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.83□□□□□ -0.2
CD74P04233 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.83□□□□□ -0.2
CD74P04233 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CD74P04233 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD74P04233 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 AC087481.3-201ENST00000602886 1894 ntBASIC13.82□□□□□ -0.2
CD74P04233 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CD74P04233 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 SLC22A20-204ENST00000530038 1673 ntBASIC13.82□□□□□ -0.2
CD74P04233 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.82□□□□□ -0.2
CD74P04233 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CD74P04233 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.82□□□□□ -0.2
CD74P04233 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CD74P04233 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.82□□□□□ -0.2
CD74P04233 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.82□□□□□ -0.2
CD74P04233 AK4P3-201ENST00000418260 669 ntBASIC13.82□□□□□ -0.2
CD74P04233 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CD74P04233 PRYP5-201ENST00000451909 266 ntBASIC13.82□□□□□ -0.2
CD74P04233 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.82□□□□□ -0.2
CD74P04233 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.82□□□□□ -0.2
CD74P04233 LINC01238-205ENST00000567549 1107 ntBASIC13.82□□□□□ -0.2
CD74P04233 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.82□□□□□ -0.2
CD74P04233 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.82□□□□□ -0.2
CD74P04233 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.82□□□□□ -0.2
CD74P04233 AC005363.2-201ENST00000618631 242 ntBASIC13.82□□□□□ -0.2
CD74P04233 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.82□□□□□ -0.2
CD74P04233 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.82□□□□□ -0.2
CD74P04233 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
CD74P04233 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 AC007292.2-201ENST00000593524 1812 ntBASIC13.82□□□□□ -0.2
CD74P04233 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.82□□□□□ -0.2
CD74P04233 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CD74P04233 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.82□□□□□ -0.2
CD74P04233 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.82□□□□□ -0.2
CD74P04233 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.82□□□□□ -0.2
CD74P04233 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 LINC01101-201ENST00000622953 1884 ntBASIC13.82□□□□□ -0.2
CD74P04233 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD74P04233 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms