Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
OPN1SWP03999 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
OPN1SWP03999 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
OPN1SWP03999 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
OPN1SWP03999 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
OPN1SWP03999 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
OPN1SWP03999 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.4■□□□□ 0.06
OPN1SWP03999 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
OPN1SWP03999 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
OPN1SWP03999 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
OPN1SWP03999 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.39■□□□□ 0.05
OPN1SWP03999 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.39■□□□□ 0.05
OPN1SWP03999 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.39■□□□□ 0.05
OPN1SWP03999 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
OPN1SWP03999 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
OPN1SWP03999 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
OPN1SWP03999 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.39■□□□□ 0.05
OPN1SWP03999 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
OPN1SWP03999 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.39■□□□□ 0.05
OPN1SWP03999 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.39■□□□□ 0.05
OPN1SWP03999 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.39■□□□□ 0.05
OPN1SWP03999 RPS2P1-201ENST00000434010 821 ntBASIC15.39■□□□□ 0.05
OPN1SWP03999 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.39■□□□□ 0.05
OPN1SWP03999 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.39■□□□□ 0.05
OPN1SWP03999 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.39■□□□□ 0.05
OPN1SWP03999 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.39■□□□□ 0.05
OPN1SWP03999 AC010654.1-201ENST00000615722 808 ntBASIC15.39■□□□□ 0.05
OPN1SWP03999 AC012313.10-201ENST00000623509 926 ntBASIC15.39■□□□□ 0.05
OPN1SWP03999 AP001350.2-201ENST00000625104 1094 ntBASIC15.39■□□□□ 0.05
OPN1SWP03999 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.39■□□□□ 0.05
OPN1SWP03999 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.39■□□□□ 0.05
OPN1SWP03999 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
OPN1SWP03999 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.39■□□□□ 0.05
OPN1SWP03999 AC063926.3-201ENST00000624734 5658 ntBASIC15.39■□□□□ 0.05
OPN1SWP03999 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
OPN1SWP03999 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.39■□□□□ 0.05
OPN1SWP03999 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.39■□□□□ 0.05
OPN1SWP03999 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
OPN1SWP03999 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
OPN1SWP03999 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.39■□□□□ 0.05
OPN1SWP03999 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.39■□□□□ 0.05
OPN1SWP03999 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
OPN1SWP03999 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
OPN1SWP03999 LINC02447-202ENST00000501888 2146 ntBASIC15.38■□□□□ 0.05
OPN1SWP03999 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
OPN1SWP03999 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
OPN1SWP03999 AC103702.1-201ENST00000548801 2630 ntBASIC15.38■□□□□ 0.05
OPN1SWP03999 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPN1SWP03999 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.38■□□□□ 0.05
OPN1SWP03999 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.38■□□□□ 0.05
OPN1SWP03999 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.38■□□□□ 0.05
OPN1SWP03999 CDC14C-201ENST00000428251 1719 ntBASIC15.38■□□□□ 0.05
OPN1SWP03999 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
OPN1SWP03999 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
OPN1SWP03999 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.38■□□□□ 0.05
OPN1SWP03999 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.38■□□□□ 0.05
OPN1SWP03999 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPN1SWP03999 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.38■□□□□ 0.05
OPN1SWP03999 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.38■□□□□ 0.05
OPN1SWP03999 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.38■□□□□ 0.05
OPN1SWP03999 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.38■□□□□ 0.05
OPN1SWP03999 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
OPN1SWP03999 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.38■□□□□ 0.05
OPN1SWP03999 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPN1SWP03999 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPN1SWP03999 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.38■□□□□ 0.05
OPN1SWP03999 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.38■□□□□ 0.05
OPN1SWP03999 AC092384.3-202ENST00000564646 2873 ntBASIC15.38■□□□□ 0.05
OPN1SWP03999 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
OPN1SWP03999 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPN1SWP03999 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPN1SWP03999 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.38■□□□□ 0.05
OPN1SWP03999 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.38■□□□□ 0.05
OPN1SWP03999 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.38■□□□□ 0.05
OPN1SWP03999 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.38■□□□□ 0.05
OPN1SWP03999 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
OPN1SWP03999 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPN1SWP03999 FLJ16779-201ENST00000612722 7638 ntBASIC15.38■□□□□ 0.05
OPN1SWP03999 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPN1SWP03999 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPN1SWP03999 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms