Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SLC25A6P2-201ENST00000497974 877 ntBASIC14.6□□□□□ -0.07
APOC1P02654 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.6□□□□□ -0.07
APOC1P02654 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.6□□□□□ -0.07
APOC1P02654 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.6□□□□□ -0.07
APOC1P02654 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.6□□□□□ -0.07
APOC1P02654 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.6□□□□□ -0.07
APOC1P02654 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 GGT3P-204ENST00000453783 1664 ntBASIC14.6□□□□□ -0.07
APOC1P02654 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.6□□□□□ -0.07
APOC1P02654 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.6□□□□□ -0.07
APOC1P02654 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.6□□□□□ -0.07
APOC1P02654 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.6□□□□□ -0.07
APOC1P02654 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
APOC1P02654 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.59□□□□□ -0.07
APOC1P02654 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
APOC1P02654 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
APOC1P02654 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
APOC1P02654 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.59□□□□□ -0.07
APOC1P02654 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
APOC1P02654 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 AC073621.1-201ENST00000392730 636 ntBASIC14.59□□□□□ -0.07
APOC1P02654 IGHV3-65-201ENST00000523210 341 ntBASIC14.59□□□□□ -0.07
APOC1P02654 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.59□□□□□ -0.07
APOC1P02654 CYP2A7P1-201ENST00000595391 815 ntBASIC14.59□□□□□ -0.07
APOC1P02654 AL121912.1-201ENST00000603683 238 ntBASIC14.59□□□□□ -0.07
APOC1P02654 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.59□□□□□ -0.07
APOC1P02654 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
APOC1P02654 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
APOC1P02654 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
APOC1P02654 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.59□□□□□ -0.07
APOC1P02654 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC1P02654 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
APOC1P02654 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
APOC1P02654 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
APOC1P02654 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.07
APOC1P02654 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
APOC1P02654 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
APOC1P02654 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
APOC1P02654 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.58□□□□□ -0.08
APOC1P02654 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.58□□□□□ -0.08
APOC1P02654 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.58□□□□□ -0.08
APOC1P02654 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.58□□□□□ -0.08
APOC1P02654 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC1P02654 MRPL20P1-201ENST00000400819 433 ntBASIC14.58□□□□□ -0.08
APOC1P02654 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC1P02654 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC1P02654 KRT18P67-201ENST00000432816 1264 ntBASIC14.58□□□□□ -0.08
APOC1P02654 FAM197Y8-203ENST00000450145 560 ntBASIC14.58□□□□□ -0.08
APOC1P02654 POU5F1P6-201ENST00000466990 990 ntBASIC14.58□□□□□ -0.08
APOC1P02654 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
APOC1P02654 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.58□□□□□ -0.08
APOC1P02654 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.58□□□□□ -0.08
APOC1P02654 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.58□□□□□ -0.08
APOC1P02654 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 AL356488.2-201ENST00000602755 427 ntBASIC14.58□□□□□ -0.08
APOC1P02654 AC020765.3-201ENST00000613051 740 ntBASIC14.58□□□□□ -0.08
APOC1P02654 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
APOC1P02654 MTHFR-217ENST00000641820 1569 ntBASIC14.58□□□□□ -0.08
APOC1P02654 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC1P02654 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
APOC1P02654 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC1P02654 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms