Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DRAP01903 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DRAP01903 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 AC004461.1-201ENST00000412461 403 ntBASIC17.64■□□□□ 0.41
HLA-DRAP01903 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 AC142381.1-201ENST00000426099 345 ntBASIC17.64■□□□□ 0.41
HLA-DRAP01903 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DRAP01903 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DRAP01903 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 AC069335.1-201ENST00000489972 472 ntBASIC17.64■□□□□ 0.41
HLA-DRAP01903 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DRAP01903 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 AP000842.3-202ENST00000569238 1080 ntBASIC17.64■□□□□ 0.41
HLA-DRAP01903 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DRAP01903 AL596087.1-201ENST00000400979 1969 ntBASIC17.64■□□□□ 0.41
HLA-DRAP01903 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DRAP01903 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DRAP01903 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DRAP01903 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DRAP01903 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 IGHV3-62-201ENST00000520057 340 ntBASIC17.63■□□□□ 0.41
HLA-DRAP01903 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 DOC2GP-204ENST00000639052 2548 ntBASIC17.63■□□□□ 0.41
HLA-DRAP01903 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DRAP01903 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DRAP01903 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.62■□□□□ 0.41
HLA-DRAP01903 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 MIR346-201ENST00000362234 95 ntBASIC17.62■□□□□ 0.41
HLA-DRAP01903 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 KRT8P23-201ENST00000560090 1207 ntBASIC17.62■□□□□ 0.41
HLA-DRAP01903 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 SPTSSB-204ENST00000617024 1292 ntBASIC17.62■□□□□ 0.41
HLA-DRAP01903 AC134684.3-201ENST00000641758 218 ntBASIC17.62■□□□□ 0.41
HLA-DRAP01903 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms