Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 AC004461.1-201ENST00000412461 403 ntBASIC12.7□□□□□ -0.38
TRBV12-3P01733 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 PRYP6-201ENST00000514804 343 ntBASIC12.7□□□□□ -0.38
TRBV12-3P01733 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 AC027307.2-201ENST00000591252 911 ntBASIC12.7□□□□□ -0.38
TRBV12-3P01733 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 AL691403.2-201ENST00000618460 490 ntBASIC12.7□□□□□ -0.38
TRBV12-3P01733 AC139530.3-201ENST00000620344 690 ntBASIC12.7□□□□□ -0.38
TRBV12-3P01733 AL513210.1-201ENST00000629608 234 ntBASIC12.7□□□□□ -0.38
TRBV12-3P01733 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 AL592309.1-201ENST00000443127 649 ntBASIC12.69□□□□□ -0.38
TRBV12-3P01733 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 AC069335.1-201ENST00000489972 472 ntBASIC12.69□□□□□ -0.38
TRBV12-3P01733 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 REXO1L8P-201ENST00000604378 1897 ntBASIC12.69□□□□□ -0.38
TRBV12-3P01733 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.69□□□□□ -0.38
TRBV12-3P01733 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV12-3P01733 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.68□□□□□ -0.38
TRBV12-3P01733 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV12-3P01733 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV12-3P01733 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV12-3P01733 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV12-3P01733 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV12-3P01733 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV12-3P01733 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV12-3P01733 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV12-3P01733 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms