Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.52■□□□□ 0.72
MBD4O95243 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
MBD4O95243 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.52■□□□□ 0.71
MBD4O95243 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.52■□□□□ 0.71
MBD4O95243 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
MBD4O95243 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
MBD4O95243 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
MBD4O95243 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MBD4O95243 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.51■□□□□ 0.71
MBD4O95243 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
MBD4O95243 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
MBD4O95243 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.51■□□□□ 0.71
MBD4O95243 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MBD4O95243 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.51■□□□□ 0.71
MBD4O95243 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.51■□□□□ 0.71
MBD4O95243 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.51■□□□□ 0.71
MBD4O95243 AC092580.3-201ENST00000430932 139 ntBASIC19.51■□□□□ 0.71
MBD4O95243 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.51■□□□□ 0.71
MBD4O95243 AC093214.1-201ENST00000511688 1107 ntBASIC19.51■□□□□ 0.71
MBD4O95243 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.51■□□□□ 0.71
MBD4O95243 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.51■□□□□ 0.71
MBD4O95243 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.51■□□□□ 0.71
MBD4O95243 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.51■□□□□ 0.71
MBD4O95243 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.51■□□□□ 0.71
MBD4O95243 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.51■□□□□ 0.71
MBD4O95243 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.51■□□□□ 0.71
MBD4O95243 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.51■□□□□ 0.71
MBD4O95243 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
MBD4O95243 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 AL592424.1-201ENST00000563624 1536 ntBASIC19.51■□□□□ 0.71
MBD4O95243 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD4O95243 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
MBD4O95243 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.5■□□□□ 0.71
MBD4O95243 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
MBD4O95243 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.5■□□□□ 0.71
MBD4O95243 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
MBD4O95243 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 MTND6P24-201ENST00000440466 518 ntBASIC19.5■□□□□ 0.71
MBD4O95243 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.5■□□□□ 0.71
MBD4O95243 IGHV3-42-201ENST00000520410 361 ntBASIC19.5■□□□□ 0.71
MBD4O95243 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
MBD4O95243 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.5■□□□□ 0.71
MBD4O95243 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.5■□□□□ 0.71
MBD4O95243 AL390754.1-201ENST00000619088 582 ntBASIC19.5■□□□□ 0.71
MBD4O95243 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.5■□□□□ 0.71
MBD4O95243 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
MBD4O95243 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MBD4O95243 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.49■□□□□ 0.71
MBD4O95243 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
MBD4O95243 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD4O95243 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD4O95243 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MBD4O95243 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 AC097493.3-201ENST00000509725 367 ntBASIC19.49■□□□□ 0.71
MBD4O95243 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.49■□□□□ 0.71
MBD4O95243 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD4O95243 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD4O95243 AL158211.3-201ENST00000607385 239 ntBASIC19.49■□□□□ 0.71
MBD4O95243 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD4O95243 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MBD4O95243 AC092364.2-201ENST00000596710 2692 ntBASIC19.49■□□□□ 0.71
MBD4O95243 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms