Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC7.18□□□□□ -1.26
USH2AO75445 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC7.18□□□□□ -1.26
USH2AO75445 FGFR3P1-201ENST00000449999 601 ntBASIC7.18□□□□□ -1.26
USH2AO75445 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 AC104596.2-201ENST00000512793 793 ntBASIC7.18□□□□□ -1.26
USH2AO75445 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
USH2AO75445 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC7.18□□□□□ -1.26
USH2AO75445 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC7.18□□□□□ -1.26
USH2AO75445 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC7.18□□□□□ -1.26
USH2AO75445 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
USH2AO75445 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 RELA-227ENST00000615805 2236 ntTSL 5 BASIC7.18□□□□□ -1.26
USH2AO75445 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
USH2AO75445 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC7.18□□□□□ -1.26
USH2AO75445 Z97180.1-201ENST00000445173 988 ntBASIC7.18□□□□□ -1.26
USH2AO75445 ALG1L13P-202ENST00000519320 584 ntBASIC7.18□□□□□ -1.26
USH2AO75445 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 CSH2-206ENST00000560142 749 ntTSL 5 BASIC7.18□□□□□ -1.26
USH2AO75445 AP001065.2-201ENST00000617205 644 ntBASIC7.18□□□□□ -1.26
USH2AO75445 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
USH2AO75445 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC7.17□□□□□ -1.26
USH2AO75445 CYP51A1P3-201ENST00000400072 1428 ntBASIC7.17□□□□□ -1.26
USH2AO75445 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC7.17□□□□□ -1.26
USH2AO75445 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC7.17□□□□□ -1.26
USH2AO75445 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 AC026410.1-201ENST00000507366 1101 ntBASIC7.17□□□□□ -1.26
USH2AO75445 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC7.17□□□□□ -1.26
USH2AO75445 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC7.17□□□□□ -1.26
USH2AO75445 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 C2orf27AP3-201ENST00000434123 579 ntBASIC7.17□□□□□ -1.26
USH2AO75445 AL139008.1-201ENST00000437894 228 ntBASIC7.17□□□□□ -1.26
USH2AO75445 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC7.17□□□□□ -1.26
USH2AO75445 AL354718.3-201ENST00000616414 581 ntBASIC7.17□□□□□ -1.26
USH2AO75445 CR382287.1-201ENST00000623954 586 ntBASIC7.17□□□□□ -1.26
USH2AO75445 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC7.17□□□□□ -1.26
USH2AO75445 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
USH2AO75445 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 SNX33P1-201ENST00000592116 1762 ntBASIC7.17□□□□□ -1.26
USH2AO75445 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
USH2AO75445 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC7.17□□□□□ -1.26
USH2AO75445 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC7.17□□□□□ -1.26
USH2AO75445 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC7.17□□□□□ -1.26
USH2AO75445 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
USH2AO75445 AC006453.4-201ENST00000636949 1252 ntBASIC7.17□□□□□ -1.26
USH2AO75445 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC7.17□□□□□ -1.26
USH2AO75445 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC7.17□□□□□ -1.26
USH2AO75445 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC7.17□□□□□ -1.26
USH2AO75445 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 AC078991.1-201ENST00000437297 610 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms