Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.24■□□□□ 0.83
SMARCA5O60264 PRYP6-201ENST00000514804 343 ntBASIC20.24■□□□□ 0.83
SMARCA5O60264 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.24■□□□□ 0.83
SMARCA5O60264 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.24■□□□□ 0.83
SMARCA5O60264 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.24■□□□□ 0.83
SMARCA5O60264 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.24■□□□□ 0.83
SMARCA5O60264 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.24■□□□□ 0.83
SMARCA5O60264 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SMARCA5O60264 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SMARCA5O60264 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.24■□□□□ 0.83
SMARCA5O60264 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.24■□□□□ 0.83
SMARCA5O60264 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
SMARCA5O60264 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SMARCA5O60264 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
SMARCA5O60264 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SMARCA5O60264 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.23■□□□□ 0.83
SMARCA5O60264 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.23■□□□□ 0.83
SMARCA5O60264 RPSAP43-201ENST00000402237 625 ntBASIC20.23■□□□□ 0.83
SMARCA5O60264 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.23■□□□□ 0.83
SMARCA5O60264 BX842568.4-201ENST00000421222 227 ntBASIC20.23■□□□□ 0.83
SMARCA5O60264 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.23■□□□□ 0.83
SMARCA5O60264 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.23■□□□□ 0.83
SMARCA5O60264 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 TIMM8BP1-201ENST00000452384 211 ntBASIC20.23■□□□□ 0.83
SMARCA5O60264 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.23■□□□□ 0.83
SMARCA5O60264 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.23■□□□□ 0.83
SMARCA5O60264 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.23■□□□□ 0.83
SMARCA5O60264 MIR4469-201ENST00000583919 79 ntBASIC20.23■□□□□ 0.83
SMARCA5O60264 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.23■□□□□ 0.83
SMARCA5O60264 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.23■□□□□ 0.83
SMARCA5O60264 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.23■□□□□ 0.83
SMARCA5O60264 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.23■□□□□ 0.83
SMARCA5O60264 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCA5O60264 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.23■□□□□ 0.83
SMARCA5O60264 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
SMARCA5O60264 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.22■□□□□ 0.83
SMARCA5O60264 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SMARCA5O60264 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SMARCA5O60264 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.22■□□□□ 0.83
SMARCA5O60264 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.22■□□□□ 0.83
SMARCA5O60264 GPX1P2-201ENST00000429271 606 ntBASIC20.22■□□□□ 0.83
SMARCA5O60264 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.22■□□□□ 0.83
SMARCA5O60264 SPCS2P4-201ENST00000436160 681 ntBASIC20.22■□□□□ 0.83
SMARCA5O60264 CEND1P1-201ENST00000451006 455 ntBASIC20.22■□□□□ 0.83
SMARCA5O60264 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.22■□□□□ 0.83
SMARCA5O60264 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCA5O60264 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.22■□□□□ 0.83
SMARCA5O60264 AC092865.5-201ENST00000545435 363 ntBASIC20.22■□□□□ 0.83
SMARCA5O60264 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.22■□□□□ 0.83
SMARCA5O60264 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.22■□□□□ 0.83
SMARCA5O60264 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.22■□□□□ 0.83
SMARCA5O60264 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.22■□□□□ 0.83
SMARCA5O60264 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SMARCA5O60264 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SMARCA5O60264 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.22■□□□□ 0.83
SMARCA5O60264 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCA5O60264 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.22■□□□□ 0.83
SMARCA5O60264 PAUPAR-201ENST00000630360 2965 ntBASIC20.22■□□□□ 0.83
SMARCA5O60264 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCA5O60264 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 ELL2P1-201ENST00000413990 1906 ntBASIC20.21■□□□□ 0.83
SMARCA5O60264 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
SMARCA5O60264 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCA5O60264 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms