Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
EXTL3O43909 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 HLA-H-201ENST00000383620 1096 ntBASIC17.77■□□□□ 0.44
EXTL3O43909 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
EXTL3O43909 MIR3197-201ENST00000582241 73 ntBASIC17.77■□□□□ 0.44
EXTL3O43909 AL365330.1-201ENST00000607459 531 ntBASIC17.77■□□□□ 0.44
EXTL3O43909 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
EXTL3O43909 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
EXTL3O43909 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EXTL3O43909 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EXTL3O43909 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EXTL3O43909 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EXTL3O43909 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EXTL3O43909 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
EXTL3O43909 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
EXTL3O43909 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.77■□□□□ 0.43
EXTL3O43909 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EXTL3O43909 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
EXTL3O43909 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.76■□□□□ 0.43
EXTL3O43909 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.76■□□□□ 0.43
EXTL3O43909 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.76■□□□□ 0.43
EXTL3O43909 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.76■□□□□ 0.43
EXTL3O43909 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.76■□□□□ 0.43
EXTL3O43909 AP3S2-216ENST00000617003 1561 ntBASIC17.76■□□□□ 0.43
EXTL3O43909 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.76■□□□□ 0.43
EXTL3O43909 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.76■□□□□ 0.43
EXTL3O43909 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.76■□□□□ 0.43
EXTL3O43909 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.76■□□□□ 0.43
EXTL3O43909 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.76■□□□□ 0.43
EXTL3O43909 ALG1L8P-201ENST00000533887 760 ntBASIC17.76■□□□□ 0.43
EXTL3O43909 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.76■□□□□ 0.43
EXTL3O43909 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.76■□□□□ 0.43
EXTL3O43909 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.76■□□□□ 0.43
EXTL3O43909 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.76■□□□□ 0.43
EXTL3O43909 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.76■□□□□ 0.43
EXTL3O43909 CYP2T1P-202ENST00000641596 2535 ntBASIC17.76■□□□□ 0.43
EXTL3O43909 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
EXTL3O43909 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.76■□□□□ 0.43
EXTL3O43909 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
EXTL3O43909 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EXTL3O43909 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.75■□□□□ 0.43
EXTL3O43909 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
EXTL3O43909 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
EXTL3O43909 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
EXTL3O43909 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
EXTL3O43909 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.75■□□□□ 0.43
EXTL3O43909 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
EXTL3O43909 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
EXTL3O43909 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.75■□□□□ 0.43
EXTL3O43909 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.75■□□□□ 0.43
EXTL3O43909 AL645939.2-201ENST00000427340 991 ntBASIC17.75■□□□□ 0.43
EXTL3O43909 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.75■□□□□ 0.43
EXTL3O43909 RBPMS2P1-201ENST00000437762 623 ntBASIC17.75■□□□□ 0.43
EXTL3O43909 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.75■□□□□ 0.43
EXTL3O43909 RARRES2P9-201ENST00000565168 469 ntBASIC17.75■□□□□ 0.43
EXTL3O43909 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
EXTL3O43909 AC024267.1-201ENST00000582320 895 ntBASIC17.75■□□□□ 0.43
EXTL3O43909 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.75■□□□□ 0.43
EXTL3O43909 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.75■□□□□ 0.43
EXTL3O43909 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.75■□□□□ 0.43
EXTL3O43909 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
EXTL3O43909 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.75■□□□□ 0.43
EXTL3O43909 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.75■□□□□ 0.43
EXTL3O43909 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms