Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
ATP2A1O14983 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 AL353779.1-201ENST00000434793 351 ntBASIC18.71■□□□□ 0.59
ATP2A1O14983 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.71■□□□□ 0.59
ATP2A1O14983 SERBP1P3-201ENST00000459980 809 ntBASIC18.71■□□□□ 0.59
ATP2A1O14983 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ATP2A1O14983 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.71■□□□□ 0.59
ATP2A1O14983 TP53TG3HP-202ENST00000569755 579 ntBASIC18.71■□□□□ 0.59
ATP2A1O14983 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.71■□□□□ 0.59
ATP2A1O14983 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.71■□□□□ 0.59
ATP2A1O14983 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.71■□□□□ 0.59
ATP2A1O14983 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP2A1O14983 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATP2A1O14983 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 LINC01144-201ENST00000626198 1710 ntBASIC18.71■□□□□ 0.59
ATP2A1O14983 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 PCGF3-213ENST00000620529 1899 ntBASIC18.71■□□□□ 0.59
ATP2A1O14983 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
ATP2A1O14983 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP2A1O14983 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP2A1O14983 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP2A1O14983 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP2A1O14983 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATP2A1O14983 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATP2A1O14983 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 COX5BP8-201ENST00000416911 349 ntBASIC18.7■□□□□ 0.58
ATP2A1O14983 AC114501.2-201ENST00000439631 535 ntBASIC18.7■□□□□ 0.58
ATP2A1O14983 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.7■□□□□ 0.58
ATP2A1O14983 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP2A1O14983 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 API5-211ENST00000534695 560 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP2A1O14983 AC135586.1-201ENST00000539323 574 ntBASIC18.7■□□□□ 0.58
ATP2A1O14983 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.7■□□□□ 0.58
ATP2A1O14983 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP2A1O14983 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP2A1O14983 AL033527.5-202ENST00000641632 1098 ntBASIC18.7■□□□□ 0.58
ATP2A1O14983 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ATP2A1O14983 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2A1O14983 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP2A1O14983 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ATP2A1O14983 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP2A1O14983 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP2A1O14983 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATP2A1O14983 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATP2A1O14983 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATP2A1O14983 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
ATP2A1O14983 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATP2A1O14983 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATP2A1O14983 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP2A1O14983 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP2A1O14983 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP2A1O14983 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP2A1O14983 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP2A1O14983 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP2A1O14983 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.69■□□□□ 0.58
ATP2A1O14983 GGT3P-204ENST00000453783 1664 ntBASIC18.69■□□□□ 0.58
ATP2A1O14983 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
ATP2A1O14983 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP2A1O14983 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms