Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.25■□□□□ 0.19
IFRD1O00458 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.25■□□□□ 0.19
IFRD1O00458 AC211486.1-202ENST00000416371 468 ntBASIC16.25■□□□□ 0.19
IFRD1O00458 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.25■□□□□ 0.19
IFRD1O00458 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.25■□□□□ 0.19
IFRD1O00458 AC211476.1-201ENST00000503899 468 ntBASIC16.25■□□□□ 0.19
IFRD1O00458 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
IFRD1O00458 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.25■□□□□ 0.19
IFRD1O00458 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.25■□□□□ 0.19
IFRD1O00458 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 WASH6P-202ENST00000359512 1437 ntBASIC16.25■□□□□ 0.19
IFRD1O00458 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
IFRD1O00458 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 AL662844.4-201ENST00000606367 2838 ntBASIC16.25■□□□□ 0.19
IFRD1O00458 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.25■□□□□ 0.19
IFRD1O00458 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 MTHFR-217ENST00000641820 1569 ntBASIC16.25■□□□□ 0.19
IFRD1O00458 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.25■□□□□ 0.19
IFRD1O00458 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IFRD1O00458 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
IFRD1O00458 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.24■□□□□ 0.19
IFRD1O00458 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
IFRD1O00458 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
IFRD1O00458 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
IFRD1O00458 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 AL355306.1-201ENST00000415580 579 ntBASIC16.24■□□□□ 0.19
IFRD1O00458 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.24■□□□□ 0.19
IFRD1O00458 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.24■□□□□ 0.19
IFRD1O00458 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 RN7SL589P-201ENST00000481268 310 ntBASIC16.24■□□□□ 0.19
IFRD1O00458 KRT18P34-201ENST00000488218 1270 ntBASIC16.24■□□□□ 0.19
IFRD1O00458 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 YBX1P5-201ENST00000509441 847 ntBASIC16.24■□□□□ 0.19
IFRD1O00458 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.24■□□□□ 0.19
IFRD1O00458 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.24■□□□□ 0.19
IFRD1O00458 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.24■□□□□ 0.19
IFRD1O00458 AC099522.2-201ENST00000607001 744 ntBASIC16.24■□□□□ 0.19
IFRD1O00458 AC079781.4-201ENST00000641908 219 ntBASIC16.24■□□□□ 0.19
IFRD1O00458 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
IFRD1O00458 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
IFRD1O00458 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.24■□□□□ 0.19
IFRD1O00458 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.24■□□□□ 0.19
IFRD1O00458 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.24■□□□□ 0.19
IFRD1O00458 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFRD1O00458 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IFRD1O00458 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.23■□□□□ 0.19
IFRD1O00458 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 AKAP8P1-201ENST00000434743 1349 ntBASIC16.23■□□□□ 0.19
IFRD1O00458 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
IFRD1O00458 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.23■□□□□ 0.19
IFRD1O00458 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.23■□□□□ 0.19
IFRD1O00458 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 AL512652.2-201ENST00000625156 1716 ntBASIC16.23■□□□□ 0.19
IFRD1O00458 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.23■□□□□ 0.19
IFRD1O00458 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms