Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.52■□□□□ 0.4
O00370 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
O00370 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
O00370 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
O00370 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
O00370 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
O00370 AKAP8P1-201ENST00000434743 1349 ntBASIC17.52■□□□□ 0.4
O00370 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
O00370 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
O00370 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.52■□□□□ 0.4
O00370 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
O00370 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
O00370 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.52■□□□□ 0.4
O00370 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.52■□□□□ 0.4
O00370 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.52■□□□□ 0.4
O00370 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.52■□□□□ 0.4
O00370 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.52■□□□□ 0.4
O00370 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.52■□□□□ 0.4
O00370 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.52■□□□□ 0.4
O00370 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
O00370 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
O00370 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
O00370 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
O00370 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.52■□□□□ 0.4
O00370 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
O00370 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
O00370 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
O00370 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.52■□□□□ 0.39
O00370 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
O00370 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
O00370 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
O00370 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
O00370 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
O00370 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
O00370 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.51■□□□□ 0.39
O00370 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
O00370 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.51■□□□□ 0.39
O00370 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.51■□□□□ 0.39
O00370 AL513523.2-202ENST00000427283 2040 ntBASIC17.51■□□□□ 0.39
O00370 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.51■□□□□ 0.39
O00370 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.51■□□□□ 0.39
O00370 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.51■□□□□ 0.39
O00370 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 AL135744.1-201ENST00000565098 629 ntBASIC17.51■□□□□ 0.39
O00370 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 AC023511.2-201ENST00000618803 211 ntBASIC17.51■□□□□ 0.39
O00370 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.51■□□□□ 0.39
O00370 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.51■□□□□ 0.39
O00370 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
O00370 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
O00370 AC132872.4-202ENST00000622924 2756 ntBASIC17.51■□□□□ 0.39
O00370 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 AC007950.2-201ENST00000615045 2347 ntBASIC17.5■□□□□ 0.39
O00370 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.5■□□□□ 0.39
O00370 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.5■□□□□ 0.39
O00370 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
O00370 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.5■□□□□ 0.39
O00370 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
O00370 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.5■□□□□ 0.39
O00370 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 TFAMP1-201ENST00000412727 736 ntBASIC17.5■□□□□ 0.39
O00370 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.5■□□□□ 0.39
O00370 FAM86C2P-203ENST00000528684 1004 ntBASIC17.5■□□□□ 0.39
O00370 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.5■□□□□ 0.39
O00370 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.5■□□□□ 0.39
O00370 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 MIR3687-2-201ENST00000577708 61 ntBASIC17.5■□□□□ 0.39
O00370 MIR4469-201ENST00000583919 79 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms