Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.11■□□□□ 0.33
CCDC188H7C350 AC020658.6-201ENST00000623564 1870 ntBASIC17.11■□□□□ 0.33
CCDC188H7C350 U82695.1-201ENST00000635752 1889 ntBASIC17.11■□□□□ 0.33
CCDC188H7C350 IER3-202ENST00000376377 1350 ntBASIC17.11■□□□□ 0.33
CCDC188H7C350 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC188H7C350 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC188H7C350 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC188H7C350 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC188H7C350 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC188H7C350 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC188H7C350 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC188H7C350 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC188H7C350 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC188H7C350 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC188H7C350 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC188H7C350 AC008677.1-201ENST00000519230 1561 ntBASIC17.11■□□□□ 0.33
CCDC188H7C350 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC188H7C350 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC188H7C350 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC188H7C350 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 TMBIM7P-203ENST00000641617 1718 ntBASIC17.1■□□□□ 0.33
CCDC188H7C350 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC188H7C350 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC188H7C350 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 TNRC18P2-201ENST00000417666 2714 ntBASIC17.1■□□□□ 0.33
CCDC188H7C350 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC188H7C350 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC188H7C350 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC188H7C350 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC188H7C350 NPAP1P7-201ENST00000613027 823 ntBASIC17.1■□□□□ 0.33
CCDC188H7C350 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.1■□□□□ 0.33
CCDC188H7C350 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC188H7C350 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC188H7C350 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC188H7C350 AC129492.6-201ENST00000611383 1305 ntBASIC17.1■□□□□ 0.33
CCDC188H7C350 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC188H7C350 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC188H7C350 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC188H7C350 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC188H7C350 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC188H7C350 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC188H7C350 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC188H7C350 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
CCDC188H7C350 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC188H7C350 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC188H7C350 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC188H7C350 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC188H7C350 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC188H7C350 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC188H7C350 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC188H7C350 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CCDC188H7C350 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC188H7C350 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC188H7C350 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms