Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 AC099548.2-209ENST00000480264 625 ntBASIC18.43■□□□□ 0.54
LOC285556D6RIA3 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.43■□□□□ 0.54
LOC285556D6RIA3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 AL359711.2-201ENST00000563105 872 ntBASIC18.43■□□□□ 0.54
LOC285556D6RIA3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 MIR4538-201ENST00000581377 78 ntBASIC18.43■□□□□ 0.54
LOC285556D6RIA3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.43■□□□□ 0.54
LOC285556D6RIA3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 MIR1908-201ENST00000410394 80 ntBASIC18.42■□□□□ 0.54
LOC285556D6RIA3 AC136604.1-201ENST00000418535 575 ntBASIC18.42■□□□□ 0.54
LOC285556D6RIA3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 KRT90P-201ENST00000549264 1064 ntBASIC18.42■□□□□ 0.54
LOC285556D6RIA3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 RPL7P3-201ENST00000441388 714 ntBASIC18.42■□□□□ 0.54
LOC285556D6RIA3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 PTP4A1P2-201ENST00000546033 454 ntBASIC18.42■□□□□ 0.54
LOC285556D6RIA3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.42■□□□□ 0.54
LOC285556D6RIA3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 AC012441.1-201ENST00000446669 685 ntBASIC18.41■□□□□ 0.54
LOC285556D6RIA3 AL355864.2-201ENST00000447420 863 ntBASIC18.41■□□□□ 0.54
LOC285556D6RIA3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LOC285556D6RIA3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.4■□□□□ 0.54
LOC285556D6RIA3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC285556D6RIA3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LOC285556D6RIA3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.4■□□□□ 0.54
LOC285556D6RIA3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LOC285556D6RIA3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LOC285556D6RIA3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.4■□□□□ 0.54
LOC285556D6RIA3 ACTG1P3-201ENST00000431775 1114 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms