Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AC023274.1-201ENST00000418278 595 ntBASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PDPK2P-202ENST00000562415 1191 ntBASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AC026691.1-201ENST00000602502 2017 ntBASIC20.14■□□□□ 0.81
TRIM6-TRIM34B2RNG4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 POU5F1P6-201ENST00000466990 990 ntBASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AC068137.2-201ENST00000605408 478 ntBASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AC005622.1-201ENST00000636801 1703 ntBASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM6-TRIM34B2RNG4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AC092474.2-201ENST00000424288 719 ntBASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AP000347.1-202ENST00000435868 847 ntBASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AC109635.5-201ENST00000533593 962 ntBASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AC006449.6-201ENST00000612330 2296 ntBASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms