Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 AL671883.3-201ENST00000603274 991 ntBASIC12.34□□□□□ -0.43
KNCNA6PVL3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 GGT3P-204ENST00000453783 1664 ntBASIC12.34□□□□□ -0.43
KNCNA6PVL3 AC067930.6-201ENST00000623257 4947 ntBASIC12.34□□□□□ -0.43
KNCNA6PVL3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 PCDHB19P-201ENST00000570871 2371 ntBASIC12.34□□□□□ -0.43
KNCNA6PVL3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.34□□□□□ -0.43
KNCNA6PVL3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KNCNA6PVL3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.43
KNCNA6PVL3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
KNCNA6PVL3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.43
KNCNA6PVL3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.43
KNCNA6PVL3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
KNCNA6PVL3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 GPAA1P2-202ENST00000606848 1787 ntBASIC12.33□□□□□ -0.44
KNCNA6PVL3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.33□□□□□ -0.44
KNCNA6PVL3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 AC040169.1-201ENST00000565382 521 ntBASIC12.33□□□□□ -0.44
KNCNA6PVL3 AC002347.1-201ENST00000569543 541 ntBASIC12.33□□□□□ -0.44
KNCNA6PVL3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 AL009183.1-201ENST00000603760 355 ntBASIC12.33□□□□□ -0.44
KNCNA6PVL3 AC021097.1-201ENST00000607902 574 ntBASIC12.33□□□□□ -0.44
KNCNA6PVL3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms