Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD54BQ9Y620 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 AKAP8P1-201ENST00000434743 1349 ntBASIC17.05■□□□□ 0.32
RAD54BQ9Y620 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 IGHV3-62-201ENST00000520057 340 ntBASIC17.05■□□□□ 0.32
RAD54BQ9Y620 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 AL390955.2-201ENST00000603032 514 ntBASIC17.05■□□□□ 0.32
RAD54BQ9Y620 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 UXT-AS1-201ENST00000590504 1525 ntBASIC17.05■□□□□ 0.32
RAD54BQ9Y620 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.05■□□□□ 0.32
RAD54BQ9Y620 AL139384.1-201ENST00000612143 3047 ntBASIC17.05■□□□□ 0.32
RAD54BQ9Y620 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 GPS2P2-201ENST00000430745 888 ntBASIC17.04■□□□□ 0.32
RAD54BQ9Y620 RBPMS2P1-201ENST00000437762 623 ntBASIC17.04■□□□□ 0.32
RAD54BQ9Y620 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD54BQ9Y620 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms