Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC011467.2-201ENST00000598425 242 ntBASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB1Q9Y5G3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 AL645929.1-201ENST00000420084 975 ntBASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 AC083849.1-201ENST00000615227 514 ntBASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 AL109954.1-202ENST00000564051 2148 ntBASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 TMBIM7P-203ENST00000641617 1718 ntBASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB1Q9Y5G3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 KRT8P49-201ENST00000604166 1432 ntBASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms