Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00588Q9Y4M8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 LINC01144-201ENST00000626198 1710 ntBASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 AC092580.3-201ENST00000430932 139 ntBASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 MTND6P24-201ENST00000440466 518 ntBASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 AC024267.1-201ENST00000582320 895 ntBASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 AL035456.1-201ENST00000456064 1369 ntBASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00588Q9Y4M8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 AC241585.1-201ENST00000433527 519 ntBASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 AC105021.1-202ENST00000570572 669 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms