Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 BRWD1P1-201ENST00000401091 371 ntBASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 TDH-203ENST00000531764 1110 ntBASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 AL365330.1-201ENST00000607459 531 ntBASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCBQ9Y3I0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 BCYRN1-201ENST00000418539 200 ntBASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 RNA5SP412-201ENST00000516234 123 ntBASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 AL158212.4-201ENST00000624062 1286 ntBASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCBQ9Y3I0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 U82695.1-201ENST00000635752 1889 ntBASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 AC092933.1-201ENST00000393644 945 ntBASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 CSF2RBP1-201ENST00000447905 391 ntBASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCBQ9Y3I0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms