Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 MIR5100-201ENST00000579544 119 ntBASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 CYP2A7P1-201ENST00000595391 815 ntBASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 AL022326.1-202ENST00000641533 845 ntBASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 AP005117.1-201ENST00000584346 1413 ntBASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2D4Q9Y2X8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 RN7SL850P-201ENST00000579959 291 ntBASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 AC020765.3-201ENST00000613051 740 ntBASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 AL589182.2-201ENST00000619332 1049 ntBASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 AF228730.7-201ENST00000641842 219 ntBASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D4Q9Y2X8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms