Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 KRT18P38-201ENST00000449496 1282 ntBASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 POU5F1P6-201ENST00000466990 990 ntBASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 OR2I1P-210ENST00000642037 4691 ntBASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 AC069224.1-201ENST00000566372 1715 ntBASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 LIN28AP1-201ENST00000429574 405 ntBASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 YBX1P2-201ENST00000489612 999 ntBASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 AC010203.1-204ENST00000548782 407 ntBASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 AC011840.4-201ENST00000578471 627 ntBASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 SBF1P1-201ENST00000444527 5631 ntBASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.5□□□□□ -0.25
RCL1Q9Y2P8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms