Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 AC004233.3-201ENST00000607794 1269 ntBASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 AL512652.2-201ENST00000625156 1716 ntBASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.44■□□□□ 0.22
NCKAP1Q9Y2A7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 AL645728.1-201ENST00000366221 2101 ntBASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 TSSK5P-201ENST00000423978 907 ntBASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 GPAA1P2-202ENST00000606848 1787 ntBASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 AC087499.5-201ENST00000452760 1342 ntBASIC16.43■□□□□ 0.22
NCKAP1Q9Y2A7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 AC093724.1-201ENST00000448659 1027 ntBASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 SERBP1P5-201ENST00000510079 1181 ntBASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 AC026979.3-201ENST00000607315 403 ntBASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 AL358472.5-202ENST00000641448 1267 ntBASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms