Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 ABBA01031663.1-201ENST00000635630 790 ntBASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 AC105020.1-201ENST00000435356 2205 ntBASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 POU5F1P6-201ENST00000466990 990 ntBASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 RHOXF1P1-202ENST00000635473 501 ntBASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHRF1Q9P1Y6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 AC005622.1-201ENST00000636801 1703 ntBASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 AC006033.1-201ENST00000440505 426 ntBASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 VDAC1P7-201ENST00000462417 847 ntBASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 CLUHP6-201ENST00000580789 941 ntBASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PHRF1Q9P1Y6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 AC134915.1-201ENST00000426461 574 ntBASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 AC026954.1-201ENST00000429771 1293 ntBASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 RPL13AP20-201ENST00000459725 609 ntBASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 RN7SL560P-201ENST00000577943 264 ntBASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 LETM1P2-201ENST00000597330 2178 ntBASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PHRF1Q9P1Y6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms