Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 PCGF3-213ENST00000620529 1899 ntBASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 AC092552.1-201ENST00000547243 906 ntBASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 REXO1L6P-201ENST00000603433 1515 ntBASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.23■□□□□ 0.51
PDLIM7Q9NR12 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 TMEM14DP-201ENST00000422205 345 ntBASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 AC055876.2-201ENST00000531834 546 ntBASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 AC044860.1-202ENST00000559481 777 ntBASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 NKILA-202ENST00000614771 2598 ntBASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM7Q9NR12 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 LINC01144-201ENST00000626198 1710 ntBASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 FAM86MP-201ENST00000340703 885 ntBASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 AC098859.1-201ENST00000502915 1238 ntBASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 COX11-210ENST00000639671 696 ntBASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.21■□□□□ 0.51
PDLIM7Q9NR12 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms