Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C12orf4Q9NQ89 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
C12orf4Q9NQ89 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C12orf4Q9NQ89 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 AC132938.5-201ENST00000624980 1813 ntBASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 AC126335.2-201ENST00000623362 4637 ntBASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.41□□□□□ -0.1
C12orf4Q9NQ89 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 AC011467.2-201ENST00000598425 242 ntBASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 LINC01023-201ENST00000606054 436 ntBASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 AC026748.1-201ENST00000624349 3251 ntBASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C12orf4Q9NQ89 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms