Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 AL139400.1-201ENST00000366220 510 ntBASIC17.36■□□□□ 0.37
CD248Q9HCU0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 AP000344.2-201ENST00000512987 629 ntBASIC17.36■□□□□ 0.37
CD248Q9HCU0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 LINC02084-201ENST00000606069 1096 ntBASIC17.36■□□□□ 0.37
CD248Q9HCU0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 AL139327.4-201ENST00000612362 153 ntBASIC17.36■□□□□ 0.37
CD248Q9HCU0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 AC133963.1-201ENST00000504166 1679 ntBASIC17.36■□□□□ 0.37
CD248Q9HCU0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CD248Q9HCU0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD248Q9HCU0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms