Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 U82695.1-201ENST00000635752 1889 ntBASIC17.67■□□□□ 0.42
NXF3Q9H4D5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 AGGF1P2-201ENST00000426656 2106 ntBASIC17.66■□□□□ 0.42
NXF3Q9H4D5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 AC009477.1-201ENST00000452936 217 ntBASIC17.66■□□□□ 0.42
NXF3Q9H4D5 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.66■□□□□ 0.42
NXF3Q9H4D5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NXF3Q9H4D5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 AC009407.1-201ENST00000568958 598 ntBASIC17.65■□□□□ 0.42
NXF3Q9H4D5 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 AC087499.5-201ENST00000452760 1342 ntBASIC17.65■□□□□ 0.42
NXF3Q9H4D5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NXF3Q9H4D5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NXF3Q9H4D5 ALOX12P2-203ENST00000570921 1945 ntBASIC17.64■□□□□ 0.42
NXF3Q9H4D5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NXF3Q9H4D5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NXF3Q9H4D5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 AC008738.7-201ENST00000609744 511 ntBASIC17.64■□□□□ 0.41
NXF3Q9H4D5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NXF3Q9H4D5 AD000864.1-201ENST00000624076 2295 ntBASIC17.64■□□□□ 0.41
NXF3Q9H4D5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms